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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913909.1_cds_XP_016463919.1_56997
CDS Infomation

[gene=LOC107786918] [db_xref=GeneID:107786918] [protein=polygalacturonase-like] [protein_id=XP_016463919.1] [location=join(59910..60344,60723..61012,61983..62208,62461..62688)] [gbkey=CDS]
Sequence

ATGGCCAACTTCAAAACCATGACATGTACCGGTGTTTCTTTGTTGCTCTTCTTTTGTTTA
ATACCTTCTTGTTTAGCCTACAATGTGGTTAGTTTTGGGGCTAGGGGAGATGGGAGGACA
GACTCAACTTCCGCATTTCTTCGCGCTTGGTCTGCTGCCTGCCACTCTACTAGCCAGGCC
AATGTGTATATTCCACGAGGAACATATTTGGTAAGAACGTTGAATTTAAACGGCCCTTGC
CGGAGAAGAATTGAGTTCCGAATTGACGGTACTCTCATTGCTCCGACCAATTATCACGCA
ATTGGTCATTCTGAGTTCTGGATTATGTTTTATAAGGTAAGTGGGCTTTCAGTGTATGGA
GGAACTATGAACGCCAAGGGTCATGGTTATTGGTCGTGCCGAAAGGGTGGAAAGTCTTGC
CCACAAGGAGCTAGGTCAATACAATTTATGTGGTGTAACAATGTACTGTTGAGGGGCTTA
ACATCACTCCACAGTCAAAGAGTACATGTGGGAATAGGTTACAGCAGCAATGTGAGAGTT
GAGAATGTGAAGATAATAGCCCCAAGTGGAAGCCCAAATACTGATGGCATTCATGTACAA
AACTCAAGAGGGGTTACCATTTACGGCAGCATCATCCAGACTGGAGATGACTGCATTTCC
GTTGGCCCTGGTTCCATGAACTTGTGGATTGAAAAAATTGGATGTGGACCTGGACATGGC
ATCAGCATAGGAAGTTTGGGGAGTAGTTACAACGAAGCTGGAGTTGCGAATATAACAGTA
ACAAATTCGGTTTTCACGAAGACACAGAATGGCGTTAGAGTAAAGTCCTGGGCAAGACCA
AGTGGTGGCTATGCTAAAAATCTCATGTTCTCAAATCTTATTATGAAGAATGTTGGGTAC
CCCATAATCATTGACCAAAACTATTGTCCCAATAATAATTGCCCTCATCAGAATTCAGGA
GTAAAGGTGAGTCAAGTAACATACAAGAATGTGAAAGGGACATCATCCACACAGGCAGCT
ATGAAATTTGATTGCAGTTATACAAATCCATGCACTGGAATCAGACTGCAAGACATAAAG
CTTACTCACAATGATCGCTTAAGAAGGCCTGCAATATCCTACTGTAGAAATGCAAGTGGA
AGACGTGGTGGCACAGTCACTCCCAGGAGTTGCTTCTAA

Peptide Sequence

PEP ID

XP_016463919.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MANFKTMTCTGVSLLLFFCLIPSCLAYNVVSFGARGDGRTDSTSAFLRAWSAACHSTSQA
NVYIPRGTYLVRTLNLNGPCRRRIEFRIDGTLIAPTNYHAIGHSEFWIMFYKVSGLSVYG
GTMNAKGHGYWSCRKGGKSCPQGARSIQFMWCNNVLLRGLTSLHSQRVHVGIGYSSNVRV
ENVKIIAPSGSPNTDGIHVQNSRGVTIYGSIIQTGDDCISVGPGSMNLWIEKIGCGPGHG
ISIGSLGSSYNEAGVANITVTNSVFTKTQNGVRVKSWARPSGGYAKNLMFSNLIMKNVGY
PIIIDQNYCPNNNCPHQNSGVKVSQVTYKNVKGTSSTQAAMKFDCSYTNPCTGIRLQDIK
LTHNDRLRRPAISYCRNASGRRGGTVTPRSCF

Transcript Sequence

Gene sequence data has not been registered.